STRINGSTRING
neu3.4 neu3.4 arsa arsa galcb galcb galca galca ugt8 ugt8 gla gla st6gal2b st6gal2b st6galnac1.2 st6galnac1.2 LOC110437730 LOC110437730 tecrl2b tecrl2b prr13 prr13
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neu3.4Sialidase 3 (membrane sialidase), tandem duplicate 4. (387 aa)    
Predicted Functional Partners:
arsa
Arylsulfatase A.
    
 0.953
galcb
Galactosylceramidase b.
     
  0.900
galca
Galactocerebrosidase; Hydrolyzes the galactose ester bonds of galactosylceramide, galactosylsphingosine, lactosylceramide, and monogalactosyldiglyceride.
     
  0.900
ugt8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
   
 
  0.900
gla
Alpha-galactosidase.
     
 0.900
st6gal2b
ST6 beta-galactosamide alpha-2,6-sialyltranferase 2b; Belongs to the glycosyltransferase 29 family.
      
 0.844
st6galnac1.2
Si:ch211-51n14.2; Belongs to the glycosyltransferase 29 family.
      
 0.836
LOC110437730
Leucine-rich repeat and fibronectin type III domain-containing 4b.
    
 
 0.746
tecrl2b
Trans-2,3-enoyl-CoA reductase-like 2b.
    
 
 0.745
prr13
Proline-rich 13.
      
 0.743
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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