ligC protein (Mycolicibacter sinensis) - STRING interaction network

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Score

ligC

ATP-dependent DNA ligase LigC. (350 aa)

Predicted Functional Partners:

AEF38022.1

0.996

AEF37038.1

0.971

AEF34257.1

0.969

dnaN

0.958

polA

0.863

AEF36112.1

0.837

recC

0.805

xthA

0.802

ligA

0.798

dinG

0.683

Your Current Organism:

Mycolicibacter sinensis

NCBI taxonomy Id: 875328
Other names: M. sinensis, Mycobacterium sinense, Mycobacterium sinov, Mycobacterium sp. 506, Mycobacterium sp. JDM601, strain JDM601

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEF34257.1	ligC	JDM601_0257	JDM601_4023	Conserved hypothetical protein.	ATP-dependent DNA ligase LigC.	0.969
AEF36112.1	dinG	JDM601_2112	JDM601_1332	5'-3' exonuclease.	ATP-dependent helicase DinG.	0.719
AEF36112.1	dnaN	JDM601_2112	JDM601_0002	5'-3' exonuclease.	DNA polymerase III (beta chain) DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	0.964
AEF36112.1	ligC	JDM601_2112	JDM601_4023	5'-3' exonuclease.	ATP-dependent DNA ligase LigC.	0.837
AEF36112.1	polA	JDM601_2112	JDM601_1802	5'-3' exonuclease.	DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.723
AEF36112.1	xthA	JDM601_2112	JDM601_0401	5'-3' exonuclease.	Exodeoxyribonuclease III protein XthA.	0.836
AEF37038.1	ligC	JDM601_3038	JDM601_4023	Putative DNA ligase-like protein.	ATP-dependent DNA ligase LigC.	0.971
AEF38022.1	ligC	JDM601_4022	JDM601_4023	Conserved hypothetical protein.	ATP-dependent DNA ligase LigC.	0.996
dinG	AEF36112.1	JDM601_1332	JDM601_2112	ATP-dependent helicase DinG.	5'-3' exonuclease.	0.719
dinG	dnaN	JDM601_1332	JDM601_0002	ATP-dependent helicase DinG.	DNA polymerase III (beta chain) DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	0.869
dinG	ligC	JDM601_1332	JDM601_4023	ATP-dependent helicase DinG.	ATP-dependent DNA ligase LigC.	0.683
dinG	polA	JDM601_1332	JDM601_1802	ATP-dependent helicase DinG.	DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.945
dnaN	AEF36112.1	JDM601_0002	JDM601_2112	DNA polymerase III (beta chain) DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	5'-3' exonuclease.	0.964
dnaN	dinG	JDM601_0002	JDM601_1332	DNA polymerase III (beta chain) DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	ATP-dependent helicase DinG.	0.869
dnaN	ligC	JDM601_0002	JDM601_4023	DNA polymerase III (beta chain) DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	ATP-dependent DNA ligase LigC.	0.958
dnaN	polA	JDM601_0002	JDM601_1802	DNA polymerase III (beta chain) DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.996
dnaN	xthA	JDM601_0002	JDM601_0401	DNA polymerase III (beta chain) DnaN; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]	Exodeoxyribonuclease III protein XthA.	0.957
ligA	ligC	JDM601_2737	JDM601_4023	NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.	ATP-dependent DNA ligase LigC.	0.798
ligA	polA	JDM601_2737	JDM601_1802	NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.	DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.717
ligC	AEF34257.1	JDM601_4023	JDM601_0257	ATP-dependent DNA ligase LigC.	Conserved hypothetical protein.	0.969