Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GNAT2 | GNB1 | ENSGALP00000058253 | ENSGALP00000039575 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.984 |
GNAT2 | OPN1MSW | ENSGALP00000058253 | ENSGALP00000004483 | Uncharacterized protein. | Green-sensitive opsin; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal. | 0.984 |
GNAT2 | OTX5 | ENSGALP00000058253 | ENSGALP00000043740 | Uncharacterized protein. | Orthodenticle-related homeobox 5. | 0.591 |
GNAT2 | PRPH2 | ENSGALP00000058253 | ENSGALP00000016098 | Uncharacterized protein. | Peripherin-2; May be involved in the morphogenesis of retina outer segment disks and the development and maintenance of the retina ultrastructure. | 0.558 |
GNAT2 | RHO | ENSGALP00000058253 | ENSGALP00000032596 | Uncharacterized protein. | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity). | 0.985 |
GNAT2 | RPE65 | ENSGALP00000058253 | ENSGALP00000018351 | Uncharacterized protein. | Retinoid isomerohydrolase; Critical isomerohydrolase in the retinoid cycle involved in regeneration of 11-cis-retinal, the chromophore of rod and cone opsins. Catalyzes the cleavage and isomerization of all-trans-retinyl fatty acid esters to 11-cis-retinol which is further oxidized by 11-cis retinol dehydrogenase to 11-cis-retinal for use as visual chromophore. Essential for the production of 11-cis retinal for both rod and cone photoreceptors (By similarity). Also capable of catalyzing the isomerization of lutein to meso-zeaxanthin an eye- specific carotenoid. The soluble form binds v [...] | 0.531 |
GNB1 | GNAT2 | ENSGALP00000039575 | ENSGALP00000058253 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.984 |
GNB1 | GRK1 | ENSGALP00000039575 | ENSGALP00000069595 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.696 |
GNB1 | GRK7 | ENSGALP00000039575 | ENSGALP00000004421 | WD_REPEATS_REGION domain-containing protein. | G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | 0.515 |
GNB1 | OPN1MSW | ENSGALP00000039575 | ENSGALP00000004483 | WD_REPEATS_REGION domain-containing protein. | Green-sensitive opsin; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal. | 0.975 |
GNB1 | RHO | ENSGALP00000039575 | ENSGALP00000032596 | WD_REPEATS_REGION domain-containing protein. | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity). | 0.975 |
GRK1 | GNB1 | ENSGALP00000069595 | ENSGALP00000039575 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.696 |
GRK1 | GRK7 | ENSGALP00000069595 | ENSGALP00000004421 | Uncharacterized protein. | G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | 0.902 |
GRK1 | OPN1MSW | ENSGALP00000069595 | ENSGALP00000004483 | Uncharacterized protein. | Green-sensitive opsin; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal. | 0.990 |
GRK1 | OTX5 | ENSGALP00000069595 | ENSGALP00000043740 | Uncharacterized protein. | Orthodenticle-related homeobox 5. | 0.501 |
GRK1 | PRPH2 | ENSGALP00000069595 | ENSGALP00000016098 | Uncharacterized protein. | Peripherin-2; May be involved in the morphogenesis of retina outer segment disks and the development and maintenance of the retina ultrastructure. | 0.540 |
GRK1 | RHO | ENSGALP00000069595 | ENSGALP00000032596 | Uncharacterized protein. | Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity). | 0.990 |
GRK1 | RPE65 | ENSGALP00000069595 | ENSGALP00000018351 | Uncharacterized protein. | Retinoid isomerohydrolase; Critical isomerohydrolase in the retinoid cycle involved in regeneration of 11-cis-retinal, the chromophore of rod and cone opsins. Catalyzes the cleavage and isomerization of all-trans-retinyl fatty acid esters to 11-cis-retinol which is further oxidized by 11-cis retinol dehydrogenase to 11-cis-retinal for use as visual chromophore. Essential for the production of 11-cis retinal for both rod and cone photoreceptors (By similarity). Also capable of catalyzing the isomerization of lutein to meso-zeaxanthin an eye- specific carotenoid. The soluble form binds v [...] | 0.708 |
GRK7 | GNB1 | ENSGALP00000004421 | ENSGALP00000039575 | G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.515 |
GRK7 | GRK1 | ENSGALP00000004421 | ENSGALP00000069595 | G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | Uncharacterized protein. | 0.902 |
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