Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATM | BABAM1 | ENSGALP00000027660 | ENSGALP00000051649 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.538 |
ATM | BARD1 | ENSGALP00000027660 | ENSGALP00000005502 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.933 |
ATM | BRCA1 | ENSGALP00000027660 | ENSGALP00000004383 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.999 |
ATM | BRCC3 | ENSGALP00000027660 | ENSGALP00000008634 | Non-specific serine/threonine protein kinase. | BRCA1/BRCA2-containing complex subunit 3. | 0.548 |
ATM | BRE | ENSGALP00000027660 | ENSGALP00000016287 | Non-specific serine/threonine protein kinase. | BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...] | 0.725 |
ATM | FAM175A | ENSGALP00000027660 | ENSGALP00000018259 | Non-specific serine/threonine protein kinase. | BRCA1-A complex subunit Abraxas 1; Involved in DNA damage response and double-strand break (DSB) repair. Component of the BRCA1-A complex, acting as a central scaffold protein that assembles the various components of the complex and mediates the recruitment of BRCA1. The BRCA1-A complex specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesion sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at DSBs. This complex also possesses deubiquitinase activity that specifically removes 'Lys-63'-linked ubiquitin on histones H2A and H2AX. | 0.708 |
ATM | RNF8 | ENSGALP00000027660 | ENSGALP00000045533 | Non-specific serine/threonine protein kinase. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.907 |
ATM | UIMC1 | ENSGALP00000027660 | ENSGALP00000058439 | Non-specific serine/threonine protein kinase. | Ubiquitin interaction motif containing 1. | 0.591 |
BABAM1 | ATM | ENSGALP00000051649 | ENSGALP00000027660 | Uncharacterized protein. | Non-specific serine/threonine protein kinase. | 0.538 |
BABAM1 | BARD1 | ENSGALP00000051649 | ENSGALP00000005502 | Uncharacterized protein. | Uncharacterized protein. | 0.934 |
BABAM1 | BRCA1 | ENSGALP00000051649 | ENSGALP00000004383 | Uncharacterized protein. | Uncharacterized protein. | 0.989 |
BABAM1 | BRCC3 | ENSGALP00000051649 | ENSGALP00000008634 | Uncharacterized protein. | BRCA1/BRCA2-containing complex subunit 3. | 0.999 |
BABAM1 | BRE | ENSGALP00000051649 | ENSGALP00000016287 | Uncharacterized protein. | BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...] | 0.999 |
BABAM1 | FAM175A | ENSGALP00000051649 | ENSGALP00000018259 | Uncharacterized protein. | BRCA1-A complex subunit Abraxas 1; Involved in DNA damage response and double-strand break (DSB) repair. Component of the BRCA1-A complex, acting as a central scaffold protein that assembles the various components of the complex and mediates the recruitment of BRCA1. The BRCA1-A complex specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesion sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at DSBs. This complex also possesses deubiquitinase activity that specifically removes 'Lys-63'-linked ubiquitin on histones H2A and H2AX. | 0.999 |
BABAM1 | FAM175B | ENSGALP00000051649 | ENSGALP00000044895 | Uncharacterized protein. | MPN domain-containing protein. | 0.992 |
BABAM1 | RNF8 | ENSGALP00000051649 | ENSGALP00000045533 | Uncharacterized protein. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.634 |
BABAM1 | SHMT1 | ENSGALP00000051649 | ENSGALP00000047253 | Uncharacterized protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.746 |
BABAM1 | UIMC1 | ENSGALP00000051649 | ENSGALP00000058439 | Uncharacterized protein. | Ubiquitin interaction motif containing 1. | 0.999 |
BARD1 | ATM | ENSGALP00000005502 | ENSGALP00000027660 | Uncharacterized protein. | Non-specific serine/threonine protein kinase. | 0.933 |
BARD1 | BABAM1 | ENSGALP00000005502 | ENSGALP00000051649 | Uncharacterized protein. | Uncharacterized protein. | 0.934 |
page 1 of 5