STRINGSTRING
USP36 USP36 SUDS3 SUDS3 ZNF598 ZNF598 TRIP12 TRIP12 ZNF768 ZNF768 BRMS1L BRMS1L RAPGEF1 RAPGEF1 DHX33 DHX33 DNMBP DNMBP USP25 USP25 GPS1 GPS1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP36Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. (1142 aa)    
Predicted Functional Partners:
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.591
ZNF598
Zinc finger protein 598.
   
  
 0.572
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.536
ZNF768
Zinc finger protein 768.
      
 0.514
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.499
RAPGEF1
Rap guanine nucleotide exchange factor 1.
      
 0.491
DHX33
DEAH-box helicase 33.
    
 
 0.484
DNMBP
Dynamin binding protein.
      
 0.461
USP25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
      
 0.456
GPS1
G protein pathway suppressor 1.
      
 0.441
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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