Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK47564.1 | ABK48233.1 | Shewana3_1330 | Shewana3_2002 | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: son:SO3239.3 hypothetical flagellar hook-associated protein. | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | 0.491 |
ABK48233.1 | ABK47564.1 | Shewana3_2002 | Shewana3_1330 | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: son:SO3239.3 hypothetical flagellar hook-associated protein. | 0.491 |
ABK48233.1 | ABK48234.1 | Shewana3_2002 | Shewana3_2003 | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; KEGG: ppr:PBPRA2685 putative glycerol-3-phosphatecytidyltransferase. | 0.924 |
ABK48233.1 | ABK48235.1 | Shewana3_2002 | Shewana3_2004 | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | PFAM: Nucleotidyl transferase; KEGG: mca:MCA1439 hypothetical protein. | 0.635 |
ABK48233.1 | ABK48236.1 | Shewana3_2002 | Shewana3_2005 | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein. | 0.823 |
ABK48234.1 | ABK48233.1 | Shewana3_2003 | Shewana3_2002 | TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; KEGG: ppr:PBPRA2685 putative glycerol-3-phosphatecytidyltransferase. | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | 0.924 |
ABK48234.1 | ABK48235.1 | Shewana3_2003 | Shewana3_2004 | TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; KEGG: ppr:PBPRA2685 putative glycerol-3-phosphatecytidyltransferase. | PFAM: Nucleotidyl transferase; KEGG: mca:MCA1439 hypothetical protein. | 0.779 |
ABK48234.1 | ABK48236.1 | Shewana3_2003 | Shewana3_2005 | TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; KEGG: ppr:PBPRA2685 putative glycerol-3-phosphatecytidyltransferase. | TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein. | 0.877 |
ABK48235.1 | ABK48233.1 | Shewana3_2004 | Shewana3_2002 | PFAM: Nucleotidyl transferase; KEGG: mca:MCA1439 hypothetical protein. | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | 0.635 |
ABK48235.1 | ABK48234.1 | Shewana3_2004 | Shewana3_2003 | PFAM: Nucleotidyl transferase; KEGG: mca:MCA1439 hypothetical protein. | TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; KEGG: ppr:PBPRA2685 putative glycerol-3-phosphatecytidyltransferase. | 0.779 |
ABK48235.1 | ABK48236.1 | Shewana3_2004 | Shewana3_2005 | PFAM: Nucleotidyl transferase; KEGG: mca:MCA1439 hypothetical protein. | TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein. | 0.866 |
ABK48236.1 | ABK48233.1 | Shewana3_2005 | Shewana3_2002 | TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein. | PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bth:BT1650 putative teichoic acid biosynthesis protein F. | 0.823 |
ABK48236.1 | ABK48234.1 | Shewana3_2005 | Shewana3_2003 | TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein. | TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; KEGG: ppr:PBPRA2685 putative glycerol-3-phosphatecytidyltransferase. | 0.877 |
ABK48236.1 | ABK48235.1 | Shewana3_2005 | Shewana3_2004 | TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein. | PFAM: Nucleotidyl transferase; KEGG: mca:MCA1439 hypothetical protein. | 0.866 |