Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DHX33 | USP36 | ENSCJAP00000020857 | ENSCJAP00000036424 | Putative ATP-dependent RNA helicase DHX33 isoform 1. | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | 0.568 |
LAMP1 | RB1CC1 | ENSCJAP00000055138 | ENSCJAP00000026906 | Lysosomal associated membrane protein 1. | RB1-inducible coiled-coil protein 1 isoform 1. | 0.411 |
LAMP1 | USP36 | ENSCJAP00000055138 | ENSCJAP00000036424 | Lysosomal associated membrane protein 1. | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | 0.539 |
LAMP1 | WDFY3 | ENSCJAP00000055138 | ENSCJAP00000068971 | Lysosomal associated membrane protein 1. | WD repeat and FYVE domain containing 3. | 0.532 |
RB1CC1 | LAMP1 | ENSCJAP00000026906 | ENSCJAP00000055138 | RB1-inducible coiled-coil protein 1 isoform 1. | Lysosomal associated membrane protein 1. | 0.411 |
RB1CC1 | USP36 | ENSCJAP00000026906 | ENSCJAP00000036424 | RB1-inducible coiled-coil protein 1 isoform 1. | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | 0.566 |
RB1CC1 | WDFY3 | ENSCJAP00000026906 | ENSCJAP00000068971 | RB1-inducible coiled-coil protein 1 isoform 1. | WD repeat and FYVE domain containing 3. | 0.515 |
RCE1 | USP36 | ENSCJAP00000002082 | ENSCJAP00000036424 | Ras converting CAAX endopeptidase 1. | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | 0.690 |
SUDS3 | USP36 | ENSCJAP00000016885 | ENSCJAP00000036424 | Sin3 histone deacetylase corepressor complex component SDS3. | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | 0.672 |
TRIP12 | USP36 | ENSCJAP00000024288 | ENSCJAP00000036424 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | 0.547 |
USP36 | DHX33 | ENSCJAP00000036424 | ENSCJAP00000020857 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Putative ATP-dependent RNA helicase DHX33 isoform 1. | 0.568 |
USP36 | LAMP1 | ENSCJAP00000036424 | ENSCJAP00000055138 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Lysosomal associated membrane protein 1. | 0.539 |
USP36 | RB1CC1 | ENSCJAP00000036424 | ENSCJAP00000026906 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | RB1-inducible coiled-coil protein 1 isoform 1. | 0.566 |
USP36 | RCE1 | ENSCJAP00000036424 | ENSCJAP00000002082 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Ras converting CAAX endopeptidase 1. | 0.690 |
USP36 | SUDS3 | ENSCJAP00000036424 | ENSCJAP00000016885 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Sin3 histone deacetylase corepressor complex component SDS3. | 0.672 |
USP36 | TRIP12 | ENSCJAP00000036424 | ENSCJAP00000024288 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.547 |
USP36 | WDFY3 | ENSCJAP00000036424 | ENSCJAP00000068971 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | WD repeat and FYVE domain containing 3. | 0.596 |
USP36 | ZFP91 | ENSCJAP00000036424 | ENSCJAP00000064222 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.541 |
USP36 | ZNF598 | ENSCJAP00000036424 | ENSCJAP00000028041 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Zinc finger protein 598. | 0.583 |
USP36 | ZNF768 | ENSCJAP00000036424 | ENSCJAP00000060818 | Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. | Zinc finger protein 768. | 0.526 |
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