STRINGSTRING
PKNOX1 PKNOX1 PBX1 PBX1 PBX2 PBX2 HOXB1 HOXB1 PBX4 PBX4 TRNAU1AP TRNAU1AP HOXB2 HOXB2 PBX3 PBX3 SMAD4 SMAD4 GMEB1 GMEB1 PAX6 PAX6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKNOX1PBX/knotted 1 homeobox 1. (436 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
0.996
PBX2
PBX homeobox 2.
    
0.951
HOXB1
Homeobox B1.
   
 0.935
PBX4
PBX homeobox 4.
    
0.814
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
   
  
 0.794
HOXB2
Homeobox B2.
   
 0.662
PBX3
Homeobox domain-containing protein.
    
 0.660
SMAD4
Mothers against decapentaplegic homolog.
    
 0.568
GMEB1
Glucocorticoid modulatory element binding protein 1.
   
  
 0.527
PAX6
Uncharacterized protein.
   
 
 0.493
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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