Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E2F4 | E2F5 | ENSPTRP00000078700 | ENSPTRP00000034872 | E2F transcription factor 4, p107/p130-binding. | E2F transcription factor 5. | 0.979 |
E2F4 | LEF1 | ENSPTRP00000078700 | ENSPTRP00000079959 | E2F transcription factor 4, p107/p130-binding. | Lymphoid enhancer binding factor 1. | 0.410 |
E2F4 | SMAD2 | ENSPTRP00000078700 | ENSPTRP00000062376 | E2F transcription factor 4, p107/p130-binding. | Mothers against decapentaplegic homolog. | 0.972 |
E2F4 | SMAD3 | ENSPTRP00000078700 | ENSPTRP00000090625 | E2F transcription factor 4, p107/p130-binding. | Mothers against decapentaplegic homolog. | 0.889 |
E2F4 | SMAD4 | ENSPTRP00000078700 | ENSPTRP00000017047 | E2F transcription factor 4, p107/p130-binding. | Mothers against decapentaplegic homolog. | 0.990 |
E2F5 | E2F4 | ENSPTRP00000034872 | ENSPTRP00000078700 | E2F transcription factor 5. | E2F transcription factor 4, p107/p130-binding. | 0.979 |
E2F5 | SMAD2 | ENSPTRP00000034872 | ENSPTRP00000062376 | E2F transcription factor 5. | Mothers against decapentaplegic homolog. | 0.952 |
E2F5 | SMAD3 | ENSPTRP00000034872 | ENSPTRP00000090625 | E2F transcription factor 5. | Mothers against decapentaplegic homolog. | 0.844 |
E2F5 | SMAD4 | ENSPTRP00000034872 | ENSPTRP00000017047 | E2F transcription factor 5. | Mothers against decapentaplegic homolog. | 0.982 |
E2F5 | SMAD5 | ENSPTRP00000034872 | ENSPTRP00000080233 | E2F transcription factor 5. | Mothers against decapentaplegic homolog. | 0.489 |
LEF1 | E2F4 | ENSPTRP00000079959 | ENSPTRP00000078700 | Lymphoid enhancer binding factor 1. | E2F transcription factor 4, p107/p130-binding. | 0.410 |
LEF1 | SMAD1 | ENSPTRP00000079959 | ENSPTRP00000028297 | Lymphoid enhancer binding factor 1. | Mothers against decapentaplegic homolog. | 0.402 |
LEF1 | SMAD2 | ENSPTRP00000079959 | ENSPTRP00000062376 | Lymphoid enhancer binding factor 1. | Mothers against decapentaplegic homolog. | 0.826 |
LEF1 | SMAD3 | ENSPTRP00000079959 | ENSPTRP00000090625 | Lymphoid enhancer binding factor 1. | Mothers against decapentaplegic homolog. | 0.795 |
LEF1 | SMAD4 | ENSPTRP00000079959 | ENSPTRP00000017047 | Lymphoid enhancer binding factor 1. | Mothers against decapentaplegic homolog. | 0.984 |
SKI | SMAD1 | ENSPTRP00000000080 | ENSPTRP00000028297 | V-ski sarcoma viral oncogene homolog (Avian). | Mothers against decapentaplegic homolog. | 0.740 |
SKI | SMAD2 | ENSPTRP00000000080 | ENSPTRP00000062376 | V-ski sarcoma viral oncogene homolog (Avian). | Mothers against decapentaplegic homolog. | 0.988 |
SKI | SMAD3 | ENSPTRP00000000080 | ENSPTRP00000090625 | V-ski sarcoma viral oncogene homolog (Avian). | Mothers against decapentaplegic homolog. | 0.929 |
SKI | SMAD4 | ENSPTRP00000000080 | ENSPTRP00000017047 | V-ski sarcoma viral oncogene homolog (Avian). | Mothers against decapentaplegic homolog. | 0.992 |
SKI | SMAD5 | ENSPTRP00000000080 | ENSPTRP00000080233 | V-ski sarcoma viral oncogene homolog (Avian). | Mothers against decapentaplegic homolog. | 0.742 |
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