STRINGSTRING
NICN1 NICN1 LRRC49 LRRC49 TPGS1 TPGS1 ANKRD52 ANKRD52 TTLL1 TTLL1 USP4 USP4 TMEM178A TMEM178A SRSF7 SRSF7 NXF1 NXF1 TPGS2 TPGS2 ENSCAFP00000050878 ENSCAFP00000050878
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NICN1Nicolin-1. (213 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
   
 
 0.767
TPGS1
Tubulin polyglutamylase complex subunit 1.
   
 
 0.756
ANKRD52
Ankyrin repeat domain 52.
   
  
 0.743
TTLL1
Tubulin tyrosine ligase like 1.
   
 
 0.736
USP4
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
  
 0.733
TMEM178A
Transmembrane protein 178A.
      
 0.669
SRSF7
Serine and arginine rich splicing factor 7.
   
  
 0.648
NXF1
Nuclear RNA export factor 1.
   
  
 0.617
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
 
 0.606
ENSCAFP00000050878
Uncharacterized protein.
    
 
 0.606
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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