STRINGSTRING
RAB12 RAB12 PAQR8 PAQR8 PDLIM1 PDLIM1 DENND3 DENND3 GABRA1 GABRA1 RILPL2 RILPL2 CLIC1 CLIC1 NPR3 NPR3 SH3YL1 SH3YL1 RILP RILP TBC1D19 TBC1D19
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB12Uncharacterized protein. (65 aa)    
Predicted Functional Partners:
PAQR8
Progestin and adipoQ receptor family member 8.
   
  
 0.792
PDLIM1
PDZ and LIM domain 1.
      
 0.717
DENND3
DENN domain containing 3.
    
 
 0.693
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.645
RILPL2
Rab interacting lysosomal protein like 2.
   
 
 0.643
CLIC1
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.578
NPR3
Natriuretic peptide receptor 3.
      
 0.565
SH3YL1
SH3 and SYLF domain containing 1.
      
 0.562
RILP
Rab interacting lysosomal protein.
   
 
 0.538
TBC1D19
TBC1 domain family member 19.
   
  
 0.518
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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