Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD19 | CD4 | ENSECAP00000021666 | ENSECAP00000007248 | CD19 molecule. | CD4 molecule. | 0.962 |
CD19 | CD40 | ENSECAP00000021666 | ENSECAP00000014907 | CD19 molecule. | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | 0.945 |
CD19 | CD40LG | ENSECAP00000021666 | ENSECAP00000050128 | CD19 molecule. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.906 |
CD19 | CD80 | ENSECAP00000021666 | ENSECAP00000033208 | CD19 molecule. | CD80 molecule. | 0.837 |
CD19 | CD86 | ENSECAP00000021666 | ENSECAP00000040346 | CD19 molecule. | CD86 molecule. | 0.833 |
CD19 | IFNG | ENSECAP00000021666 | ENSECAP00000030547 | CD19 molecule. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. | 0.868 |
CD19 | TNF | ENSECAP00000021666 | ENSECAP00000001460 | CD19 molecule. | Tumor necrosis factor, membrane form; Cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. It is mainly secreted by macrophages and can induce cell death of certain tumor cell lines. It is potent pyrogen causing fever by direct action or by stimulation of interleukin-1 secretion and is implicated in the induction of cachexia, Under certain conditions it can stimulate cell proliferation and induce cell differentiation (By similarity). Induces insulin resistance in adipocytes via inhibition of insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. Induces [...] | 0.762 |
CD4 | CD19 | ENSECAP00000007248 | ENSECAP00000021666 | CD4 molecule. | CD19 molecule. | 0.962 |
CD4 | CD40 | ENSECAP00000007248 | ENSECAP00000014907 | CD4 molecule. | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | 0.924 |
CD4 | CD40LG | ENSECAP00000007248 | ENSECAP00000050128 | CD4 molecule. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.946 |
CD4 | CD80 | ENSECAP00000007248 | ENSECAP00000033208 | CD4 molecule. | CD80 molecule. | 0.943 |
CD4 | CD86 | ENSECAP00000007248 | ENSECAP00000040346 | CD4 molecule. | CD86 molecule. | 0.939 |
CD4 | IFNG | ENSECAP00000007248 | ENSECAP00000030547 | CD4 molecule. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. | 0.971 |
CD4 | TNF | ENSECAP00000007248 | ENSECAP00000001460 | CD4 molecule. | Tumor necrosis factor, membrane form; Cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. It is mainly secreted by macrophages and can induce cell death of certain tumor cell lines. It is potent pyrogen causing fever by direct action or by stimulation of interleukin-1 secretion and is implicated in the induction of cachexia, Under certain conditions it can stimulate cell proliferation and induce cell differentiation (By similarity). Induces insulin resistance in adipocytes via inhibition of insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. Induces [...] | 0.955 |
CD4 | TRAF6 | ENSECAP00000007248 | ENSECAP00000018618 | CD4 molecule. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.483 |
CD40 | CD19 | ENSECAP00000014907 | ENSECAP00000021666 | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | CD19 molecule. | 0.945 |
CD40 | CD4 | ENSECAP00000014907 | ENSECAP00000007248 | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | CD4 molecule. | 0.924 |
CD40 | CD40LG | ENSECAP00000014907 | ENSECAP00000050128 | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.999 |
CD40 | CD80 | ENSECAP00000014907 | ENSECAP00000033208 | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | CD80 molecule. | 0.976 |
CD40 | CD86 | ENSECAP00000014907 | ENSECAP00000040346 | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | CD86 molecule. | 0.976 |
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