STRINGSTRING
PDZK1IP1 PDZK1IP1 FAM111A FAM111A ASRGL1 ASRGL1 SLC5A2 SLC5A2 SYS1 SYS1 TMEM223 TMEM223 RNF6 RNF6 LGALS4 LGALS4 PKD2L1 PKD2L1 IGSF9 IGSF9 PCDH9 PCDH9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZK1IP1PDZK1-interacting protein 1. (206 aa)    
Predicted Functional Partners:
FAM111A
Family with sequence similarity 111 member A.
      
 0.780
ASRGL1
Asparaginase and isoaspartyl peptidase 1.
      
 0.636
SLC5A2
Solute carrier family 5 member 2; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
 
 0.595
SYS1
Uncharacterized protein.
      
 0.573
TMEM223
Transmembrane protein 223.
      
 0.556
RNF6
Ring finger protein 6.
      
 0.509
LGALS4
Galectin-4; Galectin that binds lactose and a related range of sugars. May be involved in the assembly of adherens junctions.
   
  
 0.505
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
      
 0.495
IGSF9
Immunoglobulin superfamily member 9.
      
 0.487
PCDH9
Protocadherin 9.
      
 0.478
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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