Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTDP1 | EAF1 | ENSBTAP00000060009 | ENSBTAP00000025560 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | ELL associated factor 1. | 0.809 |
CTDP1 | EAF2 | ENSBTAP00000060009 | ENSBTAP00000058463 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | ELL associated factor 2. | 0.805 |
CTDP1 | GTF2B | ENSBTAP00000060009 | ENSBTAP00000041650 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription initiation factor IIB; General transcription factor that plays a role in transcription initiation by RNA polymerase II (Pol II). Involved in the pre-initiation complex (PIC) formation and Pol II recruitment at promoter DNA. Together with the TATA box-bound TBP forms the core initiation complex and provides a bridge between TBP and the Pol II- TFIIF complex. Released from the PIC early following the onset of transcription during the initiation and elongation transition and reassociates with TBP during the next transcription cycle. Associates with chromatin to core promoter [...] | 0.741 |
CTDP1 | IWS1 | ENSBTAP00000060009 | ENSBTAP00000028213 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Interacts with SUPT6H, CTD assembly factor 1. | 0.832 |
CTDP1 | POLR2A | ENSBTAP00000060009 | ENSBTAP00000065848 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
CTDP1 | POLR2B | ENSBTAP00000060009 | ENSBTAP00000025800 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.890 |
CTDP1 | SUPT5H | ENSBTAP00000060009 | ENSBTAP00000071865 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor SPT5. | 0.716 |
CTDP1 | SUPT6H | ENSBTAP00000060009 | ENSBTAP00000061169 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.855 |
CTDP1 | TCEA1 | ENSBTAP00000060009 | ENSBTAP00000004499 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | Transcription elongation factor A protein 1; Necessary for efficient RNA polymerase II transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by S-II allows the resumption of elongation from the new 3'-terminus (By similarity). Belongs to the TFS-II family. | 0.853 |
EAF1 | CTDP1 | ENSBTAP00000025560 | ENSBTAP00000060009 | ELL associated factor 1. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.809 |
EAF1 | EAF2 | ENSBTAP00000025560 | ENSBTAP00000058463 | ELL associated factor 1. | ELL associated factor 2. | 0.925 |
EAF1 | IWS1 | ENSBTAP00000025560 | ENSBTAP00000028213 | ELL associated factor 1. | Interacts with SUPT6H, CTD assembly factor 1. | 0.812 |
EAF1 | POLR2A | ENSBTAP00000025560 | ENSBTAP00000065848 | ELL associated factor 1. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.767 |
EAF1 | POLR2B | ENSBTAP00000025560 | ENSBTAP00000025800 | ELL associated factor 1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.884 |
EAF1 | SUPT5H | ENSBTAP00000025560 | ENSBTAP00000071865 | ELL associated factor 1. | Transcription elongation factor SPT5. | 0.886 |
EAF1 | SUPT6H | ENSBTAP00000025560 | ENSBTAP00000061169 | ELL associated factor 1. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.817 |
EAF1 | TCEA1 | ENSBTAP00000025560 | ENSBTAP00000004499 | ELL associated factor 1. | Transcription elongation factor A protein 1; Necessary for efficient RNA polymerase II transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by S-II allows the resumption of elongation from the new 3'-terminus (By similarity). Belongs to the TFS-II family. | 0.875 |
EAF2 | CTDP1 | ENSBTAP00000058463 | ENSBTAP00000060009 | ELL associated factor 2. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.805 |
EAF2 | EAF1 | ENSBTAP00000058463 | ENSBTAP00000025560 | ELL associated factor 2. | ELL associated factor 1. | 0.925 |
EAF2 | IWS1 | ENSBTAP00000058463 | ENSBTAP00000028213 | ELL associated factor 2. | Interacts with SUPT6H, CTD assembly factor 1. | 0.812 |
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