STRINGSTRING
YIPF5 YIPF5 YIF1B YIF1B TMEM167A TMEM167A YIPF2 YIPF2 YIPF6 YIPF6 YIF1A YIF1A RAB1A RAB1A YIPF1 YIPF1 COG5 COG5 SYVN1 SYVN1 VPS54 VPS54
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF5Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi. (257 aa)    
Predicted Functional Partners:
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.781
TMEM167A
Protein kish-A; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
    0.748
YIPF2
Protein YIPF.
   
 
 0.703
YIPF6
Protein YIPF6; May be required for stable YIPF1 and YIPF2 protein expression.
   
  
 0.678
YIF1A
Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi.
   
 
 0.652
RAB1A
RAB1A, member RAS oncogene family.
   
 
 0.648
YIPF1
Protein YIPF.
   
 
 0.641
COG5
Conserved oligomeric Golgi complex subunit 5.
   
  
 0.608
SYVN1
Synoviolin 1.
    
 
 0.597
VPS54
VPS54 subunit of GARP complex.
   
  
 0.591
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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