STRINGSTRING
RABL3 RABL3 RAB3IP RAB3IP RABGGTA RABGGTA GTF2E1 GTF2E1 RABL6 RABL6 RAB3GAP1 RAB3GAP1 RABGEF1 RABGEF1 ADGRA1 ADGRA1 SPATA5 SPATA5 RAB24 RAB24 RAB40B RAB40B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL3Rab-like protein 3. (236 aa)    
Predicted Functional Partners:
RAB3IP
RAB3A interacting protein (Rabin3).
      
 0.816
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A; Belongs to the protein prenyltransferase subunit alpha family.
    
 
 0.792
GTF2E1
General transcription factor IIE subunit 1; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (By similarity).
   
  
 0.782
RABL6
Rab-like protein 6; May enhance cellular proliferation. May reduce growth inhibitory activity of CDKN2A (By similarity); Belongs to the small GTPase superfamily. Rab family.
      
 0.742
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
  
 0.717
RABGEF1
Rab5 GDP/GTP exchange factor; Rab effector protein acting as linker between gamma-adaptin and RAB5A. Involved in endocytic membrane fusion and membrane trafficking of recycling endosomes. Stimulates nucleotide exchange on RAB5A. Can act as a ubiquitin ligase.
    
 
 0.715
ADGRA1
Adhesion G protein-coupled receptor A1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.706
SPATA5
Spermatogenesis associated 5.
  
 
 0.680
RAB24
RAB24, member RAS oncogene family.
   
  
 0.665
RAB40B
SOCS box domain-containing protein.
   
  
 0.643
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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