Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EML4 | NEK6 | ENSBTAP00000014526 | ENSBTAP00000025935 | EMAP like 4. | NIMA related kinase 6; Belongs to the protein kinase superfamily. | 0.574 |
EML4 | NEK7 | ENSBTAP00000014526 | ENSBTAP00000072429 | EMAP like 4. | NIMA related kinase 7; Belongs to the protein kinase superfamily. | 0.569 |
EML4 | NEK9 | ENSBTAP00000014526 | ENSBTAP00000022098 | EMAP like 4. | NIMA related kinase 9. | 0.661 |
EML4 | PLK1 | ENSBTAP00000014526 | ENSBTAP00000019217 | EMAP like 4. | Serine/threonine-protein kinase PLK1; Serine/threonine-protein kinase that performs several important functions throughout M phase of the cell cycle, including the regulation of centrosome maturation and spindle assembly, the removal of cohesins from chromosome arms, the inactivation of anaphase- promoting complex/cyclosome (APC/C) inhibitors, and the regulation of mitotic exit and cytokinesis. Polo-like kinase proteins acts by binding and phosphorylating proteins are that already phosphorylated on a specific motif recognized by the POLO box domains. Phosphorylates BORA, BUB1B/BUBR1, C [...] | 0.670 |
EML4 | RANBP2 | ENSBTAP00000014526 | ENSBTAP00000060769 | EMAP like 4. | E3 SUMO-protein ligase RanBP2; E3 SUMO-protein ligase which facilitates SUMO1 and SUMO2 conjugation by UBE2I. Involved in transport factor (Ran-GTP, karyopherin)-mediated protein import via the F-G repeat-containing domain which acts as a docking site for substrates. Binds single- stranded RNA (in vitro). May bind DNA. Component of the nuclear export pathway. Specific docking site for the nuclear export factor exportin- 1. Sumoylates PML at 'Lys-490' which is essential for the proper assembly of PML-NB. Recruits BICD2 to the nuclear envelope and cytoplasmic stacks of nuclear pore compl [...] | 0.666 |
IFFO1 | NEK9 | ENSBTAP00000019606 | ENSBTAP00000022098 | Intermediate filament family orphan 1; Belongs to the intermediate filament family. | NIMA related kinase 9. | 0.664 |
NEDD1 | NEK6 | ENSBTAP00000002464 | ENSBTAP00000025935 | Protein NEDD1; Required for mitosis progression. Promotes the nucleation of microtubules from the spindle. | NIMA related kinase 6; Belongs to the protein kinase superfamily. | 0.495 |
NEDD1 | NEK9 | ENSBTAP00000002464 | ENSBTAP00000022098 | Protein NEDD1; Required for mitosis progression. Promotes the nucleation of microtubules from the spindle. | NIMA related kinase 9. | 0.728 |
NEDD1 | PLK1 | ENSBTAP00000002464 | ENSBTAP00000019217 | Protein NEDD1; Required for mitosis progression. Promotes the nucleation of microtubules from the spindle. | Serine/threonine-protein kinase PLK1; Serine/threonine-protein kinase that performs several important functions throughout M phase of the cell cycle, including the regulation of centrosome maturation and spindle assembly, the removal of cohesins from chromosome arms, the inactivation of anaphase- promoting complex/cyclosome (APC/C) inhibitors, and the regulation of mitotic exit and cytokinesis. Polo-like kinase proteins acts by binding and phosphorylating proteins are that already phosphorylated on a specific motif recognized by the POLO box domains. Phosphorylates BORA, BUB1B/BUBR1, C [...] | 0.934 |
NEK6 | EML4 | ENSBTAP00000025935 | ENSBTAP00000014526 | NIMA related kinase 6; Belongs to the protein kinase superfamily. | EMAP like 4. | 0.574 |
NEK6 | NEDD1 | ENSBTAP00000025935 | ENSBTAP00000002464 | NIMA related kinase 6; Belongs to the protein kinase superfamily. | Protein NEDD1; Required for mitosis progression. Promotes the nucleation of microtubules from the spindle. | 0.495 |
NEK6 | NEK7 | ENSBTAP00000025935 | ENSBTAP00000072429 | NIMA related kinase 6; Belongs to the protein kinase superfamily. | NIMA related kinase 7; Belongs to the protein kinase superfamily. | 0.515 |
NEK6 | NEK9 | ENSBTAP00000025935 | ENSBTAP00000022098 | NIMA related kinase 6; Belongs to the protein kinase superfamily. | NIMA related kinase 9. | 0.916 |
NEK6 | RANBP2 | ENSBTAP00000025935 | ENSBTAP00000060769 | NIMA related kinase 6; Belongs to the protein kinase superfamily. | E3 SUMO-protein ligase RanBP2; E3 SUMO-protein ligase which facilitates SUMO1 and SUMO2 conjugation by UBE2I. Involved in transport factor (Ran-GTP, karyopherin)-mediated protein import via the F-G repeat-containing domain which acts as a docking site for substrates. Binds single- stranded RNA (in vitro). May bind DNA. Component of the nuclear export pathway. Specific docking site for the nuclear export factor exportin- 1. Sumoylates PML at 'Lys-490' which is essential for the proper assembly of PML-NB. Recruits BICD2 to the nuclear envelope and cytoplasmic stacks of nuclear pore compl [...] | 0.400 |
NEK7 | EML4 | ENSBTAP00000072429 | ENSBTAP00000014526 | NIMA related kinase 7; Belongs to the protein kinase superfamily. | EMAP like 4. | 0.569 |
NEK7 | NEK6 | ENSBTAP00000072429 | ENSBTAP00000025935 | NIMA related kinase 7; Belongs to the protein kinase superfamily. | NIMA related kinase 6; Belongs to the protein kinase superfamily. | 0.515 |
NEK7 | NEK9 | ENSBTAP00000072429 | ENSBTAP00000022098 | NIMA related kinase 7; Belongs to the protein kinase superfamily. | NIMA related kinase 9. | 0.939 |
NEK7 | RANBP2 | ENSBTAP00000072429 | ENSBTAP00000060769 | NIMA related kinase 7; Belongs to the protein kinase superfamily. | E3 SUMO-protein ligase RanBP2; E3 SUMO-protein ligase which facilitates SUMO1 and SUMO2 conjugation by UBE2I. Involved in transport factor (Ran-GTP, karyopherin)-mediated protein import via the F-G repeat-containing domain which acts as a docking site for substrates. Binds single- stranded RNA (in vitro). May bind DNA. Component of the nuclear export pathway. Specific docking site for the nuclear export factor exportin- 1. Sumoylates PML at 'Lys-490' which is essential for the proper assembly of PML-NB. Recruits BICD2 to the nuclear envelope and cytoplasmic stacks of nuclear pore compl [...] | 0.400 |
NEK9 | EML4 | ENSBTAP00000022098 | ENSBTAP00000014526 | NIMA related kinase 9. | EMAP like 4. | 0.661 |
NEK9 | IFFO1 | ENSBTAP00000022098 | ENSBTAP00000019606 | NIMA related kinase 9. | Intermediate filament family orphan 1; Belongs to the intermediate filament family. | 0.664 |
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