Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNOT1 | DCP1A | ENSBTAP00000027695 | ENSBTAP00000014415 | CCR4-NOT transcription complex subunit 1. | Decapping mRNA 1A. | 0.762 |
CNOT1 | DCP2 | ENSBTAP00000027695 | ENSBTAP00000054783 | CCR4-NOT transcription complex subunit 1. | Decapping mRNA 2. | 0.795 |
CNOT1 | TNPO1 | ENSBTAP00000027695 | ENSBTAP00000010491 | CCR4-NOT transcription complex subunit 1. | Transportin-1; Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis [...] | 0.554 |
CNOT1 | XRN1 | ENSBTAP00000027695 | ENSBTAP00000015318 | CCR4-NOT transcription complex subunit 1. | 5'-3' exoribonuclease 1. | 0.807 |
CNOT1 | ZFP36 | ENSBTAP00000027695 | ENSBTAP00000055077 | CCR4-NOT transcription complex subunit 1. | mRNA decay activator protein ZFP36; Zinc-finger RNA-binding protein that destabilizes numerous cytoplasmic AU-rich element (ARE)-containing mRNA transcripts by promoting their poly(A) tail removal or deadenylation, and hence provide a mechanism for attenuating protein synthesis. Acts as an 3'- untranslated region (UTR) ARE mRNA-binding adapter protein to communicate signaling events to the mRNA decay machinery. Recruits deadenylase CNOT7 (and probably the CCR4-NOT complex) via association with CNOT1, and hence promotes ARE-mediated mRNA deadenylation. Functions also by recruiting compo [...] | 0.847 |
DCP1A | CNOT1 | ENSBTAP00000014415 | ENSBTAP00000027695 | Decapping mRNA 1A. | CCR4-NOT transcription complex subunit 1. | 0.762 |
DCP1A | DCP2 | ENSBTAP00000014415 | ENSBTAP00000054783 | Decapping mRNA 1A. | Decapping mRNA 2. | 0.999 |
DCP1A | EXOSC8 | ENSBTAP00000014415 | ENSBTAP00000015733 | Decapping mRNA 1A. | Exosome complex component RRP43; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.527 |
DCP1A | TIA1 | ENSBTAP00000014415 | ENSBTAP00000070098 | Decapping mRNA 1A. | TIA1 cytotoxic granule associated RNA binding protein. | 0.878 |
DCP1A | TNPO1 | ENSBTAP00000014415 | ENSBTAP00000010491 | Decapping mRNA 1A. | Transportin-1; Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis [...] | 0.499 |
DCP1A | XRN1 | ENSBTAP00000014415 | ENSBTAP00000015318 | Decapping mRNA 1A. | 5'-3' exoribonuclease 1. | 0.996 |
DCP1A | ZFP36 | ENSBTAP00000014415 | ENSBTAP00000055077 | Decapping mRNA 1A. | mRNA decay activator protein ZFP36; Zinc-finger RNA-binding protein that destabilizes numerous cytoplasmic AU-rich element (ARE)-containing mRNA transcripts by promoting their poly(A) tail removal or deadenylation, and hence provide a mechanism for attenuating protein synthesis. Acts as an 3'- untranslated region (UTR) ARE mRNA-binding adapter protein to communicate signaling events to the mRNA decay machinery. Recruits deadenylase CNOT7 (and probably the CCR4-NOT complex) via association with CNOT1, and hence promotes ARE-mediated mRNA deadenylation. Functions also by recruiting compo [...] | 0.745 |
DCP2 | CNOT1 | ENSBTAP00000054783 | ENSBTAP00000027695 | Decapping mRNA 2. | CCR4-NOT transcription complex subunit 1. | 0.795 |
DCP2 | DCP1A | ENSBTAP00000054783 | ENSBTAP00000014415 | Decapping mRNA 2. | Decapping mRNA 1A. | 0.999 |
DCP2 | EXOSC8 | ENSBTAP00000054783 | ENSBTAP00000015733 | Decapping mRNA 2. | Exosome complex component RRP43; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.532 |
DCP2 | KHSRP | ENSBTAP00000054783 | ENSBTAP00000066165 | Decapping mRNA 2. | KH-type splicing regulatory protein. | 0.575 |
DCP2 | TIA1 | ENSBTAP00000054783 | ENSBTAP00000070098 | Decapping mRNA 2. | TIA1 cytotoxic granule associated RNA binding protein. | 0.564 |
DCP2 | TNPO1 | ENSBTAP00000054783 | ENSBTAP00000010491 | Decapping mRNA 2. | Transportin-1; Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis [...] | 0.550 |
DCP2 | XRN1 | ENSBTAP00000054783 | ENSBTAP00000015318 | Decapping mRNA 2. | 5'-3' exoribonuclease 1. | 0.999 |
DCP2 | ZFP36 | ENSBTAP00000054783 | ENSBTAP00000055077 | Decapping mRNA 2. | mRNA decay activator protein ZFP36; Zinc-finger RNA-binding protein that destabilizes numerous cytoplasmic AU-rich element (ARE)-containing mRNA transcripts by promoting their poly(A) tail removal or deadenylation, and hence provide a mechanism for attenuating protein synthesis. Acts as an 3'- untranslated region (UTR) ARE mRNA-binding adapter protein to communicate signaling events to the mRNA decay machinery. Recruits deadenylase CNOT7 (and probably the CCR4-NOT complex) via association with CNOT1, and hence promotes ARE-mediated mRNA deadenylation. Functions also by recruiting compo [...] | 0.892 |
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