STRINGSTRING
F751_4269 F751_4269 F751_6249 F751_6249 F751_5642 F751_5642 F751_2321 F751_2321 F751_5219 F751_5219 F751_4271 F751_4271 F751_2494 F751_2494 F751_2642 F751_2642 F751_4204 F751_4204 F751_3493 F751_3493 F751_4058 F751_4058
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_4269Histone H2A deubiquitinase MYSM1. (585 aa)    
Predicted Functional Partners:
F751_6249
Chromatin structure-remodeling complex subunit snf21.
   
 0.998
F751_5642
Histone acetyltransferase GCN5.
    
 0.976
F751_2321
Ubiquitin-40S ribosomal protein S27a-1.
   
 0.974
F751_5219
SDE2-like protein.
    
 0.974
F751_4271
Ubiquitin-NEDD8-like protein RUB2.
    
 0.972
F751_2494
Ubiquitin-like protein.
    
 0.972
F751_2642
Ubiquitin-60S ribosomal protein L40-2.
   
 0.968
F751_4204
26S proteasome non-ATPase regulatory subunit 6-like protein.
   
 0.954
F751_3493
26S proteasome non-ATPase regulatory subunit 13.
   
 0.952
F751_4058
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.948
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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