STRINGSTRING
F751_1832 F751_1832 F751_0246 F751_0246 F751_4874 F751_4874 F751_2370 F751_2370 F751_5980 F751_5980 F751_4693 F751_4693 F751_0775 F751_0775 F751_1703 F751_1703 F751_4583 F751_4583 F751_3598 F751_3598 F751_2832 F751_2832
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_1832Zinc finger CCCH domain-containing protein 36. (97 aa)    
Predicted Functional Partners:
F751_0246
Exosome complex component RRP43.
    
  0.720
F751_4874
mRNA decapping complex subunit 2.
   
 0.638
F751_2370
14-3-3-like protein; Belongs to the 14-3-3 family.
   
  0.587
F751_5980
General negative regulator of transcription subunit 1.
    
 
 0.586
F751_4693
5'-3' exoribonuclease 1.
    
 0.562
F751_0775
5'-3' exoribonuclease 1.
    
 0.562
F751_1703
mRNA-decapping enzyme-like protein.
    
 0.557
F751_4583
Exosome complex component rrp4.
    
 0.514
F751_3598
Exosome complex component CSL4.
     
 0.502
F751_2832
Exosome complex component MTR3.
    
  0.426
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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