STRINGSTRING
F751_4190 F751_4190 F751_6392 F751_6392 F751_1488 F751_1488 F751_0244 F751_0244 F751_4013 F751_4013 F751_0254 F751_0254 F751_6425 F751_6425 F751_0310 F751_0310 F751_1075 F751_1075 F751_0527 F751_0527 F751_2298 F751_2298
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_4190Squamosa promoter-binding-like protein 16. (366 aa)    
Predicted Functional Partners:
F751_6392
Squamosa promoter-binding-like protein 9.
  
     0.541
F751_1488
B3 domain-containing transcription repressor VAL2.
  
     0.537
F751_0244
Transcription factor.
  
     0.534
F751_4013
Uncharacterized protein.
  
     0.499
F751_0254
Uncharacterized protein.
  
     0.498
F751_6425
Uncharacterized protein.
  
     0.493
F751_0310
PsbP domain-containing protein 3, chloroplastic.
  
     0.468
F751_1075
Uncharacterized protein.
  
     0.463
F751_0527
E3 ubiquitin-protein ligase AIP2.
  
     0.458
F751_2298
ARM repeat protein interacting with ABF2.
  
     0.456
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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