STRINGSTRING
F751_5457 F751_5457 F751_5584 F751_5584 F751_6390 F751_6390 F751_0464 F751_0464 F751_0505 F751_0505 F751_6275 F751_6275 F751_4562 F751_4562 F751_2947 F751_2947 F751_2696 F751_2696 F751_3781 F751_3781 F751_6389 F751_6389
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_5457Cleavage and polyadenylation specificity factor CPSF30. (193 aa)    
Predicted Functional Partners:
F751_5584
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
F751_6390
Putative cleavage and polyadenylation specificity factor subunit 1.
   
 0.997
F751_0464
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.996
F751_0505
mRNA 3'-end-processing protein rna-14.
    
 0.995
F751_6275
Cleavage and polyadenylation specificity factor subunit 5.
    
 0.995
F751_4562
Poly(A) polymerase.
   
 0.990
F751_2947
Flowering time control protein FY.
   
 0.989
F751_2696
Uncharacterized protein C4G9.04c.
   
 0.989
F751_3781
Polyribonucleotide 5'-hydroxyl-kinase Clp1.
    
 0.988
F751_6389
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.987
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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