STRINGSTRING
F751_0291 F751_0291 F751_0764 F751_0764 F751_2321 F751_2321 F751_5416 F751_5416 F751_5197 F751_5197 F751_5203 F751_5203
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_0291E3 ubiquitin-protein ligase makorin. (316 aa)    
Predicted Functional Partners:
F751_0764
E3 ubiquitin-protein ligase UPL3.
     
 0.792
F751_2321
Ubiquitin-40S ribosomal protein S27a-1.
    
  0.549
F751_5416
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.444
F751_5197
Penta-EF hand domain-containing protein 1.
   
    0.410
F751_5203
Uncharacterized protein.
   
    0.410
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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