version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (194 aa)
(Arthrobacter sp. FB24)
Predicted Functional Partners:
Arth_1219
LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosom [...] (199 aa)
      0.937
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (79 aa)
      0.895
Arth_1218
Ribose-phosphate pyrophosphokinase (326 aa)
     0.877
Arth_1217
Glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Cataly [...] (508 aa)
       0.842
Arth_2831
GTP-binding protein YchF (368 aa)
      0.835
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (185 aa)
      0.830
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (150 aa)
      0.826
Arth_1245
Transcription-repair coupling factor (1222 aa)
       0.792
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (320 aa)
       0.775
Arth_0151
Mername-AA223 peptidase. Metallo peptidase. MEROPS family M41 (689 aa)
       0.772
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth