version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroE
Shikimate dehydrogenase (293 aa)
(Arthrobacter sp. FB24)
Predicted Functional Partners:
Arth_3392
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (158 aa)
     0.991
Arth_2273
Shikimate kinase (199 aa)
    0.989
Arth_4079
Xylose isomerase domain protein TIM barrel (629 aa)
      0.987
Arth_2272
3-dehydroquinate synthase (363 aa)
   0.883
Arth_2653
3-phosphoshikimate 1-carboxyvinyltransferase (460 aa)
     0.871
Arth_3498
Shikimate dehydrogenase (278 aa)
    0.847
Arth_2889
Shikimate dehydrogenase (276 aa)
     0.832
aroC
Chorismate synthase (399 aa)
      0.829
Arth_4078
Protocatechuate 3,4-dioxygenase, beta subunit (300 aa)
       0.712
Arth_4077
Protocatechuate 3,4-dioxygenase, alpha subunit (201 aa)
      0.708
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth