version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, recA interacts with lexA causing an autocatalytic cleavage which disrupts the DNA-binding part of lexA, leading to derepression of the SOS regulon and eventually DNA repair (By similarity) (215 aa)
(Burkholderia cenocepacia 2424)
Predicted Functional Partners:
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (356 aa)
    0.982
Bcen2424_1599
Putative uncharacterized protein (111 aa)
       0.770
Bcen2424_2142
DNA-directed DNA polymerase (361 aa)
      0.692
Bcen2424_1598
Putative uncharacterized protein (239 aa)
       0.673
Bcen2424_2210
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (707 aa)
      0.646
Bcen2424_1314
MATE efflux family protein (459 aa)
      0.620
Bcen2424_2828
Putative uncharacterized protein (235 aa)
      0.598
gcp
putative metalloendopeptidase, glycoprotease family (346 aa)
       0.584
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dep [...] (279 aa)
       0.579
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (By similarity) (124 aa)
       0.570
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth