version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (By similarity) (426 aa)
(Acidothermus cellulolyticus)
Predicted Functional Partners:
Acel_1059
Histidinol phosphate aminotransferase (406 aa)
       0.899
Acel_0292
L-aspartate aminotransferase (400 aa)
       0.899
Acel_0035
Aminotransferase (391 aa)
       0.899
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'- [...] (224 aa)
      0.838
Acel_1255
DNA-3-methyladenine glycosylase (213 aa)
      0.806
Acel_0798
Glycyl-tRNA synthetase (465 aa)
       0.764
gltX
Glutamyl-tRNA synthetase (504 aa)
     0.717
Acel_1262
Glutamate N-acetyltransferase (384 aa)
       0.713
argB
N-acetylglutamate kinase (296 aa)
       0.713
Acel_1260
Acetylornithine aminotransferase (399 aa)
       0.713
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth