version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (286 aa)
(Acidothermus cellulolyticus)
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (121 aa)
• ••  • 0.991
rpsP
SSU ribosomal protein S16P (174 aa)
•  •  • 0.988
rimM
Ribosome maturation factor rimM; An accessory protein needed during the final step in the assem [...] (176 aa)
•       0.969
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (161 aa)
••      0.929
Acel_1563
Signal recognition particle subunit FFH/SRP54 (Srp54) (551 aa)
•     • 0.915
infA
Translation initiation factor IF-1; No specific function has so far been attributed to this ini [...] (73 aa)
• ••  • 0.880
rpsM
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts sever [...] (126 aa)
•  •  • 0.875
Acel_0335
LSU ribosomal protein L17P (222 aa)
•  •    0.854
Acel_1560
RNA-binding protein (Contains KH domain)-like (96 aa)
•       0.854
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several dispa [...] (135 aa)
•  •    0.840
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth