version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (244 aa)
(Bacillus thuringiensis Hakam)
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (114 aa)
• ••  • 0.990
rimM
Ribosome maturation factor rimM; An accessory protein needed during the final step in the assem [...] (193 aa)
•  •  • 0.988
rpsP
ribosomal protein S16 (30S ribosomal protein S16) (90 aa)
• ••  • 0.981
BALH_3474
Putative uncharacterized protein (77 aa)
•       0.930
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (158 aa)
••      0.921
BALH_3476
Signal recognition particle subunit FFH/SRP54 (Srp54) (449 aa)
•     • 0.896
smpB
SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (155 aa)
• •     0.879
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (257 aa)
•       0.854
priA
Replication restart DNA helicase PriA (801 aa)
• •     0.845
BALH_3469
Ras superfamily GTP-binding protein YlqF (314 aa)
•       0.828
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth