trmD protein (Bifidobacterium adolescentis) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	trmD	tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (306 aa)
		(Bifidobacterium adolescentis)
Predicted Functional Partners:
	rplS	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (133 aa)	•			•	•	0.967
	rimM	Ribosome maturation factor rimM; An accessory protein needed during the final step in the assem [...] (195 aa)	•					0.915
	ispF	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (158 aa)	•	•				0.912
	rpsP	30S ribosomal protein S16 (149 aa)	•					0.904
	BAD_0208	Putative uncharacterized protein (77 aa)	•					0.901
	smpB	SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (159 aa)	•		•			0.877
	ffh	Signal recognition particle protein (549 aa)	•				•	0.819
	BAD_0234	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By similarit [...] (264 aa)	•					0.763
	ftsY	FtsY signal recognition particle (420 aa)	•					0.749
	pheT	Phenylalanyl-tRNA synthetase beta chain (867 aa)	•		•			0.735

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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