version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (199 aa)
(Bifidobacterium adolescentis)
Predicted Functional Partners:
mfd
Transcription-repair coupling factor (1188 aa)
       0.968
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (82 aa)
      0.879
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (204 aa)
     0.856
BAD_0609
Widely conserved hypothetical GTPase-like protein (366 aa)
      0.837
prsA2
Ribose-phosphate pyrophosphokinase (339 aa)
      0.798
prsA1
Ribose-phosphate pyrophosphokinase (337 aa)
      0.795
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (460 aa)
       0.788
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. I [...] (432 aa)
       0.780
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (148 aa)
       0.777
BAD_0409
Putative uncharacterized protein (699 aa)
       0.772
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth