version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, recA interacts with lexA causing an autocatalytic cleavage which disrupts the DNA-binding part of lexA, leading to derepression of the SOS regulon and eventually DNA repair (By similarity) (257 aa)
(Bifidobacterium adolescentis)
Predicted Functional Partners:
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (394 aa)
    0.981
BAD_1114
Putative uncharacterized protein (101 aa)
       0.656
nrdR
Transcriptional repressor nrdR; Negatively regulates transcription of bacterial ribonucleotide [...] (170 aa)
       0.656
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (696 aa)
      0.653
gcp
Probable O-sialoglycoprotein endopeptidase (347 aa)
       0.629
gltX
Glutamyl-tRNA synthetase (506 aa)
       0.627
BAD_0303
DNA-damage-inducible protein P (471 aa)
      0.622
BAD_0647
Putative uncharacterized protein (190 aa)
       0.571
BAD_1000
Putative uncharacterized protein (149 aa)
       0.570
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also fo [...] (620 aa)
       0.544
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth