version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
allA
Ureidoglycolate hydrolase; Involved in the anaerobic utilization of allantoin. Reinforces the induction of genes involved in the degradation of allantoin and glyoxylate by producing glyoxylate (By similarity) (160 aa)
(Escherichia coli O1)
Predicted Functional Partners:
allD
Ureidoglycolate dehydrogenase (349 aa)
      0.962
gcl
Glyoxylate carboligase (623 aa)
     0.960
ECED1_3671
Ureidoglycolate dehydrogenase (336 aa)
      0.904
allR
HTH-type transcriptional repressor allR; Negative regulator of allantoin and glyoxylate utiliza [...] (271 aa)
      0.876
allC
N-carbamoyl-L-amino acid amidohydrolase (411 aa)
     0.830
allS
Putative DNA-binding transcriptional activator of the allD operon; Positive regulator essential [...] (308 aa)
      0.822
glcB
Malate synthase G (723 aa)
      0.810
glcD
Glycolate oxidase subunit, FAD-linked (499 aa)
       0.800
ECS88_3862
Putative uncharacterized protein (212 aa)
       0.800
aceB
Malate synthase A (539 aa)
       0.800
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth