version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
Pden_0884
Glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase (441 aa)
(Paracoccus denitrificans)
Predicted Functional Partners:
proS
Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction [...] (450 aa)
      0.916
cysS
Cysteinyl-tRNA synthetase (462 aa)
      0.806
Pden_0883
protein of unknown function DUF1025 (135 aa)
       0.659
Pden_0882
6-phosphofructokinase (319 aa)
       0.659
Pden_2970
30S ribosomal protein S9 (159 aa)
      0.565
Pden_1909
protein of unknown function DUF1321 (153 aa)
       0.557
Pden_0659
DNA topoisomerase; The reaction catalyzed by topoisomerases leads to the conversion of one topo [...] (851 aa)
       0.551
Pden_0879
Small GTP-binding protein (216 aa)
       0.550
ispDF
Bifunctional enzyme ispD/ispF; Bifunctional enzyme that catalyzes the formation of 4- diphospho [...] (411 aa)
       0.530
Pden_0853
NH(3)-dependent NAD(+) synthetase (556 aa)
       0.498
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth