version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
dapA
Dihydrodipicolinate synthase (292 aa)
(Azoarcus sp. BH72)
Predicted Functional Partners:
dapB
DapB protein (269 aa)
    0.999
asd
Asd protein (366 aa)
    0.992
hom
Homoserine dehydrogenase (435 aa)
      0.951
lysA2
Diaminopimelate decarboxylase (424 aa)
     0.928
lysC
aspartate kinase (408 aa)
     0.917
nlpB
Putative lipoprotein (379 aa)
       0.889
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (273 aa)
    0.877
dapF
Diaminopimelate epimerase (277 aa)
     0.796
smpB
SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (148 aa)
       0.772
pgsA
Probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (190 aa)
       0.755
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth