version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
alr
Alanine racemase; Provides the D-alanine required for cell wall biosynthesis (By similarity) (353 aa)
(Azoarcus sp. BH72)
Predicted Functional Partners:
dadA2
D-amino acid dehydrogenase small subunit (437 aa)
    0.959
ddl
D-alanine--D-alanine ligase; Cell wall formation (By similarity) (304 aa)
    0.957
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Ca [...] (478 aa)
    0.946
alaS
Alanyl-tRNA synthetase (885 aa)
      0.930
daaA
D-alanine transaminase (285 aa)
       0.899
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (By similari [...] (330 aa)
       0.800
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for [...] (917 aa)
       0.800
dnaB
DnaB protein (469 aa)
       0.796
radA
DNA repair protein radA; May play a role in the repair of endogenous alkylation damage (By simi [...] (456 aa)
       0.792
rpsR
30S ribosomal protein S18 (91 aa)
       0.769
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth