alr protein (Acidovorax avenae) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	alr	Alanine racemase; Provides the D-alanine required for cell wall biosynthesis (By similarity) (369 aa)
		(Acidovorax avenae)
Predicted Functional Partners:
	alaS	Alanyl-tRNA synthetase (948 aa)	•				•		0.929
	ddl	D-alanine--D-alanine ligase; Cell wall formation (By similarity) (334 aa)					•	•	0.928
	Aave_0817	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Ca [...] (501 aa)	•	•	•		•		0.920
	Aave_0254	Putative uncharacterized protein (290 aa)	•						0.864
	Aave_2000	Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for [...] (951 aa)					•		0.800
	Aave_1232	Primary replicative DNA helicase (473 aa)	•						0.792
	Aave_0262	DNA repair protein radA; May play a role in the repair of endogenous alkylation damage (By simi [...] (459 aa)	•						0.788
	rpsR	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (93 aa)	•						0.755
	rplI	50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (150 aa)	•						0.752
	Aave_4507	D-amino acid dehydrogenase small subunit (439 aa)	•			•	•	•	0.750

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth