version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) (By similarity) (225 aa)
(Acidovorax avenae)
Predicted Functional Partners:
Aave_1345
Pyridoxal kinase (313 aa)
     0.914
Aave_1199
Pyridoxal phosphate biosynthetic protein PdxJ (258 aa)
     0.863
Aave_3606
DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic a [...] (271 aa)
       0.772
Aave_2802
Putative uncharacterized protein (727 aa)
       0.719
Aave_0669
Hemerythrin HHE cation binding domain protein (198 aa)
      0.661
Aave_3221
N-isopropylammelide isopropylaminohydrolase (425 aa)
       0.655
Aave_4045
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reacti [...] (410 aa)
      0.649
coq7
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Oxygenase that introduces the hydr [...] (205 aa)
       0.630
Aave_3702
Single-stranded-DNA-specific exonuclease RecJ (571 aa)
       0.628
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (437 aa)
       0.624
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth