version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
alaS
Alanyl-tRNA synthetase (948 aa)
(Acidovorax avenae)
Predicted Functional Partners:
alr
Alanine racemase; Provides the D-alanine required for cell wall biosynthesis (By similarity) (369 aa)
      0.929
Aave_4455
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase (255 aa)
     0.916
Aave_2000
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for [...] (951 aa)
       0.800
Aave_4640
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (354 aa)
       0.796
Aave_4641
Regulatory protein RecX (156 aa)
       0.783
Aave_3413
Aminodeoxychorismate lyase (334 aa)
       0.753
Aave_2324
aspartate kinase (423 aa)
       0.748
Aave_1052
Histidine triad (HIT) protein (132 aa)
       0.742
Aave_1873
AAA ATPase, central domain protein (462 aa)
       0.712
Aave_1003
3-dehydroquinate synthase (376 aa)
       0.705
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth