version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (213 aa)
(Acidovorax avenae)
Predicted Functional Partners:
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (210 aa)
•     • 0.927
Aave_3610
transcriptional regulator, Fis family (319 aa)
•   • • 0.880
Aave_0887
GTP-binding protein YchF (364 aa)
•     • 0.837
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (285 aa)
•       0.822
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (150 aa)
• •     0.805
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (93 aa)
•       0.792
Aave_1580
Transcription-repair coupling factor (1163 aa)
•       0.791
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (474 aa)
•       0.783
Aave_2617
FtsH peptidase. Metallo peptidase. MEROPS family M41 (641 aa)
•       0.772
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (186 aa)
  •   • 0.754
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth