hemF protein (Polaromonas naphthalenivorans)

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	hemF	Coproporphyrinogen III oxidase, aerobic (307 aa)
		(Polaromonas naphthalenivorans)
Predicted Functional Partners:
	hemE	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (369 aa)	•	•	•	•	0.997
	Pnap_1729	Phosphoribosylamine--glycine ligase (430 aa)	•				0.891
	Pnap_3090	Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbil [...] (331 aa)	•			•	0.793
	Pnap_2973	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (367 aa)	•	•		•	0.790
	Pnap_0192	Delta-aminolevulinic acid dehydratase (338 aa)	•			•	0.710
	Pnap_1728	protein of unknown function DUF28 (241 aa)	•				0.700
	fmt	Methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of meth [...] (323 aa)	•				0.659
	Pnap_0874	RNA methyltransferase, TrmH family, group 2 (159 aa)	•				0.640
	Pnap_1231	RNA-binding S4 domain protein (138 aa)	•				0.612
	Pnap_3861	Sua5/YciO/YrdC/YwlC family protein (327 aa)	•				0.606

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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interactors shown:

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additional (white) nodes		or: network depth