version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pcyA
Phycocyanobilin-ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin (By similarity) (264 aa)
(Prochlorococcus marinus 9303)
Predicted Functional Partners:
ho1
Heme oxygenase (239 aa)
      0.975
pebA
15,16-dihydrobiliverdin-ferredoxin oxidoreductase; Catalyzes the two-electron reduction of bili [...] (249 aa)
    0.939
P9303_16601
ABC-transporter, membrane spanning component (389 aa)
      0.853
cpeS
Phycoerythrin linker protein CpeS (161 aa)
      0.826
P9303_16591
Possible ABC transporter component (294 aa)
       0.789
cpeB
Phycobilisome protein (phycoerythrin beta-subunit) (181 aa)
      0.767
P9303_27391
Putative uncharacterized protein (65 aa)
       0.764
ycf34
Putative Ycf34 (92 aa)
       0.764
P9303_26451
conserved hypothetical protein in cyanobacteria (87 aa)
       0.764
ndhO
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron don [...] (81 aa)
       0.764
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth