version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroB
3-dehydroquinate synthase (359 aa)
(Burkholderia pseudomallei 1106a)
Predicted Functional Partners:
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (177 aa)
  0.999
aroA/tyrA
prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase (749 aa)
  0.991
aroC
Chorismate synthase (369 aa)
   0.990
aroQ1
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (150 aa)
    0.990
aroQ2
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (193 aa)
    0.986
BURPS1106A_3496
Shikimate 5-dehydrogenase (292 aa)
   0.983
BURPS1106A_A0483
Shikimate 5-dehydrogenase (284 aa)
    0.974
BURPS1106A_A1752
Putative phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (372 aa)
      0.955
BURPS1106A_3325
Putative phospho-2-dehydro-3-deoxyheptonate aldolase (421 aa)
      0.952
tgt
Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguani [...] (472 aa)
     0.869
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth