ubiC protein (Shewanella loihica) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	ubiC	Probable chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway (By similarity) (188 aa)
		(Shewanella loihica)
Predicted Functional Partners:
	ubiA	4-hydroxybenzoate octaprenyltransferase; Synthesis of 3-octaprenyl-4-hydroxybenzoate (By simila [...] (286 aa)	•	•	•	•	0.996
	aroC	Chorismate synthase (364 aa)			•		0.907
	Shew_2251	Anthranilate synthase, component I (517 aa)			•		0.800
	Shew_3507	ATP-dependent DNA helicase RecG (691 aa)	•				0.679
	Shew_3500	Putative endoribonuclease L-PSP (127 aa)	•				0.620
	Shew_3742	Flagellar basal body-associated protein FliL (135 aa)	•				0.618
	Shew_3033	Uncharacterized domain protein (728 aa)		•			0.582
	Shew_3374	protein of unknown function DUF1243 (207 aa)		•			0.544
	Shew_3852	ATP synthase I chain (127 aa)		•			0.531
	rlmF	Ribosomal RNA large subunit methyltransferase F; Specifically methylates the adenine in positio [...] (398 aa)	•				0.515

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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interactors shown:

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