gcvP protein (Burkholderia vietnamiensis)

STRING 9.05

gcvP protein (Burkholderia vietnamiensis) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	gcvP	glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (By similarity) (975 aa)
		(Burkholderia vietnamiensis)
Predicted Functional Partners:
	gcvT	glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the deg [...] (372 aa)	•	•	•	•	•		0.999
	gcvH	glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of gly [...] (126 aa)	•	•	•		•		0.999
	Bcep1808_7032	serine hydroxymethyltransferase; Interconversion of serine and glycine (By similarity) (419 aa)	•		•	•	•		0.982
	Bcep1808_3423	serine hydroxymethyltransferase; Interconversion of serine and glycine (By similarity) (424 aa)	•		•	•	•		0.979
	Bcep1808_3948	serine hydroxymethyltransferase; Interconversion of serine and glycine (By similarity) (415 aa)	•		•	•	•	•	0.969
	Bcep1808_0738	serine hydroxymethyltransferase; Interconversion of serine and glycine (By similarity) (431 aa)	•		•	•	•	•	0.969
	Bcep1808_1476	dihydrolipoamide dehydrogenase (476 aa)	•		•	•	•		0.968
	Bcep1808_3651	L-threonine aldolase (337 aa)			•	•	•		0.952
	Bcep1808_3788	2-amino-3-ketobutyrate coenzyme A ligase (399 aa)			•	•	•	•	0.944
	Bcep1808_2215	dihydrolipoamide dehydrogenase (590 aa)	•		•	•	•		0.942

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink