version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity) (262 aa)
(Burkholderia vietnamiensis)
Predicted Functional Partners:
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (389 aa)
• •   • 0.996
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Involved in the biosynthesis of l [...] (305 aa)
• •  •  0.994
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (216 aa)
•   • • 0.963
fabZ
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in saturated fatty acids bio [...] (155 aa)
•  •  • 0.962
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (369 aa)
• ••• ••0.955
Bcep1808_1917
Surface antigen (D15) (768 aa)
• •     0.879
Bcep1808_0829
Three-deoxy-D-manno-octulosonic-acid transferase domain protein (450 aa)
• •     0.869
Bcep1808_1910
tRNA/rRNA methyltransferase (SpoU) (260 aa)
•       0.864
Bcep1808_1916
Outer membrane chaperone Skp (OmpH) (175 aa)
•       0.845
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and [...] (398 aa)
•       0.821
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth