version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroE
Quinate/shikimate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate, respectively. Seems to play a key role in the quinate degradation pathway (283 aa)
(Corynebacterium glutamicum R)
Predicted Functional Partners:
aroD
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (145 aa)
•    •  0.978
Cgl0422
Sugar phosphate isomerases/epimerases (Phosphate isomerase/epimerase) (618 aa)
• •     0.957
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (430 aa)
••   •• 0.954
aroK
Putative uncharacterized protein; Catalyzes the specific phosphorylation of the 3-hydroxyl grou [...] (190 aa)
••   •• 0.875
aroB
Putative uncharacterized protein (365 aa)
•••  •• 0.832
aroC
hypothetical protein (410 aa)
• •     0.822
aroE3
Shikimate 5-dehydrogenase (PROBABLE SHIKIMATE 5-DEHYDROGENASE PROTEIN) (276 aa)
  •  • •0.615
aroE2
Shikimate 5-dehydrogenase (PUTATIVE SHIKIMATE / QUINATE 5-DEHYDROGENASE) (268 aa)
  •  • •0.582
Cgl0421
Putative uncharacterized protein (467 aa)
•       0.567
Cgl3061
Putative uncharacterized protein Cgl3061 (Sugar phosphate isomerase/epimerase) (293 aa)
  •     0.473
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth