version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) (445 aa)
(Bradyrhizobium sp. ORS278)
Predicted Functional Partners:
BRADO0609
bifunctional- shikimate kinase (N-terminal); dehydroquinate synthase (C-terminal) (600 aa)
   0.999
aroK
Shikimate kinase (307 aa)
    0.997
aroC
chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) (366 aa)
     0.995
cmk
Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (212 aa)
      0.994
tyrC
Protein tyrC- Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH); Prephenate dehydro [...] (311 aa)
    0.987
BRADO5961
Shikimate dehydrogenase (288 aa)
    0.949
BRADO2346
Shikimate dehydrogenase (280 aa)
    0.948
BRADO5598
Putative Shikimate dehydrogenase (293 aa)
    0.932
rpsA
30S ribosomal subunit protein S1 (569 aa)
      0.928
pheA
Chorismate mutase/prephenate dehydratase (286 aa)
     0.920
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth