version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase; KDO-8-phosphate synthetase, KDOPS) (287 aa)
(Bradyrhizobium sp. ORS278)
Predicted Functional Partners:
kpsF
Arabinose 5-phosphate isomerase (333 aa)
     0.982
kdsB
CTP-CMP-3-deoxy-D-manno-octulosonate transferase; Activates KDO (a required 8-carbon sugar) for [...] (256 aa)
    0.977
pyrG
CTP synthase (UTP--ammonia ligase) (CTP synthetase) (543 aa)
     0.926
BRADO0609
bifunctional- shikimate kinase (N-terminal); dehydroquinate synthase (C-terminal) (600 aa)
      0.889
aroC
chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) (366 aa)
      0.873
BRADO4100
Putative Permease of the major facilitator superfamily; putative Multidrug resistance protein (406 aa)
       0.869
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. I [...] (427 aa)
      0.862
cbbG
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (335 aa)
      0.830
tyrC
Protein tyrC- Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH); Prephenate dehydro [...] (311 aa)
      0.807
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine [...] (270 aa)
     0.805
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth