version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (286 aa)
(Bradyrhizobium sp. BTAi1)
Predicted Functional Partners:
kpsF
Arabinose 5-phosphate isomerase (333 aa)
     0.982
kdsB
CTP/CMP-3-deoxy-D-manno-octulosonate transferase; Activates KDO (a required 8-carbon sugar) for [...] (246 aa)
    0.977
pyrG
CTP synthase (543 aa)
     0.925
aroB
3-dehydroquinate synthase (382 aa)
      0.909
aroC
chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) (361 aa)
      0.874
BBta_4473
Putative Permease of the major facilitator superfamily (402 aa)
       0.869
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. I [...] (427 aa)
      0.861
tyrC
Prephenate dehydrogenase (311 aa)
      0.816
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynt [...] (269 aa)
     0.809
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (397 aa)
      0.780
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth